STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98806.1Cyclohexadienyl dehydratase. (440 aa)    
Predicted Functional Partners:
AKJ00157.1
Prephenate/arogenate dehydrogenase.
  
 0.956
AKJ02661.1
Chorismate mutase I.
  
 
 0.943
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.932
AKJ04597.1
Histidinol-phosphate aminotransferase.
  
 
 0.932
AKI99844.1
Aspartate aminotransferase.
  
 
 0.915
AKI99860.1
Aspartate aminotransferase.
  
 
 0.915
AKJ03938.1
Aspartate aminotransferase.
  
 
 0.915
AKJ04263.1
Aspartate aminotransferase.
  
 
 0.915
AKI99294.1
Phenylalanine-4-hydroxylase.
     
 0.909
AKI99762.1
Amino acid ABC transporter binding protein and permease protein.
 
 
 0.847
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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