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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98810.1Signal peptide peptidase SppA, 67K type. (599 aa)    
Predicted Functional Partners:
AKI98809.1
Hypothetical protein.
       0.567
AKI98811.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.490
AKI98808.1
Non-heme chloroperoxidase.
       0.488
AKJ05634.1
TPR repeat protein.
  
     0.453
AKJ00806.1
Hypothetical protein.
  
    0.422
AKJ00807.1
Glutamate synthase [NADPH] large chain.
  
    0.422
AKI98812.1
Hypothetical protein.
       0.419
AKJ02517.1
Malonyl CoA-acyl carrier protein transacylase.
      0.409
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.