STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98812.1Hypothetical protein. (826 aa)    
Predicted Functional Partners:
AKJ01833.1
TPR repeat-containing protein.
  
     0.733
AKJ06284.1
TPR repeat protein.
  
     0.720
AKJ01749.1
TPR repeat protein.
  
     0.703
AKJ01798.1
High-affnity carbon uptake protein Hat/HatR.
  
 
  0.696
AKJ06241.1
High-affnity carbon uptake protein Hat/HatR.
 
 
  0.692
AKI98803.1
Hypothetical protein.
  
 
  0.690
AKJ02673.1
WD-repeat protein.
  
 
  0.689
AKJ05112.1
High-affnity carbon uptake protein Hat/HatR.
  
 
  0.688
AKJ06146.1
Hypothetical protein.
  
     0.686
AKI98502.1
High-affnity carbon uptake protein Hat/HatR.
  
 
  0.680
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.