Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98819.1 | AKJ00954.1 | AA314_00446 | AA314_02580 | Type IV fimbrial assembly, ATPase PilB. | General secretion pathway protein F. | 0.866 |
AKI98819.1 | AKJ01723.1 | AA314_00446 | AA314_03349 | Type IV fimbrial assembly, ATPase PilB. | Twitching motility protein PilT. | 0.687 |
AKI98819.1 | AKJ02669.1 | AA314_00446 | AA314_04295 | Type IV fimbrial assembly, ATPase PilB. | Type IV fimbrial assembly, ATPase PilB. | 0.772 |
AKI98819.1 | AKJ02851.1 | AA314_00446 | AA314_04477 | Type IV fimbrial assembly, ATPase PilB. | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. | 0.771 |
AKI98819.1 | AKJ05719.1 | AA314_00446 | AA314_07345 | Type IV fimbrial assembly, ATPase PilB. | General secretion pathway protein F. | 0.835 |
AKI98819.1 | AKJ06019.1 | AA314_00446 | AA314_07645 | Type IV fimbrial assembly, ATPase PilB. | Type IV pilin PilA. | 0.706 |
AKI98819.1 | AKJ06653.1 | AA314_00446 | AA314_08279 | Type IV fimbrial assembly, ATPase PilB. | Type IV pilus biogenesis protein PilM. | 0.686 |
AKI98819.1 | AKJ06656.1 | AA314_00446 | AA314_08282 | Type IV fimbrial assembly, ATPase PilB. | Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.736 |
AKI98819.1 | AKJ06663.1 | AA314_00446 | AA314_08289 | Type IV fimbrial assembly, ATPase PilB. | Type IV fimbrial assembly protein PilC. | 0.865 |
AKI98819.1 | AKJ06664.1 | AA314_00446 | AA314_08290 | Type IV fimbrial assembly, ATPase PilB. | Twitching motility protein PilT. | 0.705 |
AKJ00954.1 | AKI98819.1 | AA314_02580 | AA314_00446 | General secretion pathway protein F. | Type IV fimbrial assembly, ATPase PilB. | 0.866 |
AKJ00954.1 | AKJ01723.1 | AA314_02580 | AA314_03349 | General secretion pathway protein F. | Twitching motility protein PilT. | 0.794 |
AKJ00954.1 | AKJ02669.1 | AA314_02580 | AA314_04295 | General secretion pathway protein F. | Type IV fimbrial assembly, ATPase PilB. | 0.754 |
AKJ00954.1 | AKJ02851.1 | AA314_02580 | AA314_04477 | General secretion pathway protein F. | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. | 0.754 |
AKJ00954.1 | AKJ05719.1 | AA314_02580 | AA314_07345 | General secretion pathway protein F. | General secretion pathway protein F. | 0.929 |
AKJ00954.1 | AKJ06019.1 | AA314_02580 | AA314_07645 | General secretion pathway protein F. | Type IV pilin PilA. | 0.799 |
AKJ00954.1 | AKJ06653.1 | AA314_02580 | AA314_08279 | General secretion pathway protein F. | Type IV pilus biogenesis protein PilM. | 0.768 |
AKJ00954.1 | AKJ06656.1 | AA314_02580 | AA314_08282 | General secretion pathway protein F. | Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.889 |
AKJ00954.1 | AKJ06664.1 | AA314_02580 | AA314_08290 | General secretion pathway protein F. | Twitching motility protein PilT. | 0.794 |
AKJ01723.1 | AKI98819.1 | AA314_03349 | AA314_00446 | Twitching motility protein PilT. | Type IV fimbrial assembly, ATPase PilB. | 0.687 |
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