Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98823.1 | AKI98824.1 | AA314_00450 | AA314_00451 | Hypothetical protein. | Hypothetical protein. | 0.668 |
AKI98823.1 | AKI98826.1 | AA314_00450 | AA314_00453 | Hypothetical protein. | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.641 |
AKI98823.1 | rnpA | AA314_00450 | AA314_00454 | Hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.641 |
AKI98823.1 | rpmH | AA314_00450 | AA314_00455 | Hypothetical protein. | LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family. | 0.624 |
AKI98823.1 | yidC | AA314_00450 | AA314_00452 | Hypothetical protein. | Inner membrane protein translocase component YidC, long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.668 |
AKI98824.1 | AKI98823.1 | AA314_00451 | AA314_00450 | Hypothetical protein. | Hypothetical protein. | 0.668 |
AKI98824.1 | AKI98826.1 | AA314_00451 | AA314_00453 | Hypothetical protein. | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.866 |
AKI98824.1 | AKJ03423.1 | AA314_00451 | AA314_05049 | Hypothetical protein. | KH domain RNA binding protein YlqC; Belongs to the UPF0109 family. | 0.787 |
AKI98824.1 | rnpA | AA314_00451 | AA314_00454 | Hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.896 |
AKI98824.1 | rplB | AA314_00451 | AA314_04731 | Hypothetical protein. | LSU ribosomal protein L2p; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.527 |
AKI98824.1 | rplP | AA314_00451 | AA314_04735 | Hypothetical protein. | LSU ribosomal protein L16p; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.509 |
AKI98824.1 | rpmH | AA314_00451 | AA314_00455 | Hypothetical protein. | LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family. | 0.788 |
AKI98824.1 | rsmG | AA314_00451 | AA314_00421 | Hypothetical protein. | rRNA small subunit 7-methylguanosine; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.597 |
AKI98824.1 | trpA | AA314_00451 | AA314_08753 | Hypothetical protein. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.509 |
AKI98824.1 | yidC | AA314_00451 | AA314_00452 | Hypothetical protein. | Inner membrane protein translocase component YidC, long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.940 |
AKI98826.1 | AKI98823.1 | AA314_00453 | AA314_00450 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Hypothetical protein. | 0.641 |
AKI98826.1 | AKI98824.1 | AA314_00453 | AA314_00451 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Hypothetical protein. | 0.866 |
AKI98826.1 | rnpA | AA314_00453 | AA314_00454 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.960 |
AKI98826.1 | rplB | AA314_00453 | AA314_04731 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | LSU ribosomal protein L2p; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.526 |
AKI98826.1 | rpmH | AA314_00453 | AA314_00455 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family. | 0.887 |
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