STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98831.1Flavin reductase. (208 aa)    
Predicted Functional Partners:
AKJ03821.1
Hypothetical protein.
  
    0.707
AKJ07177.1
Putative ATP-dependent endonuclease.
   
    0.706
AKI99757.1
Pyridoxamine 5'-phosphate oxidase.
  
    0.632
AKI98466.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.623
AKJ03047.1
Hypothetical protein.
  
    0.586
AKI98832.1
Hypothetical protein.
       0.572
AKI98859.1
Redox-sensing transcriptional regulator QorR.
  
  
 0.533
AKJ06193.1
Transcriptional regulator, HxlR family.
  
  
 0.533
AKJ03799.1
Transcriptional regulator, HxlR family.
  
  
 0.525
AKJ05122.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
  
    0.511
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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