STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98835.1Type IV pilus biogenesis protein PilQ. (165 aa)    
Predicted Functional Partners:
AKJ06652.1
Type IV pilus biogenesis protein PilN.
 
 
 0.980
AKJ06653.1
Type IV pilus biogenesis protein PilM.
 
 
 0.972
AKJ06651.1
Type IV pilus biogenesis protein PilO.
 
 
 0.963
AKJ05041.1
Hypothetical protein.
 
 
 
 0.933
AKJ06650.1
Type IV pilus biogenesis protein PilP.
 
 
 0.920
AKJ06663.1
Type IV fimbrial assembly protein PilC.
 
 
 
 0.859
AKJ00175.1
Hypothetical protein.
  
 
 0.842
AKJ06657.1
Type IV pilin PilA.
 
   
 0.796
AKJ06665.1
Type IV fimbrial assembly, ATPase PilB.
   
 
 0.758
AKJ05727.1
Putative general secretion pathway protein L.
 
 
 0.747
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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