STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98876.1Rhs family protein. (318 aa)    
Predicted Functional Partners:
AKI98877.1
Rhs-family protein.
     0.994
AKI98875.1
Hypothetical protein.
  
    0.783
AKJ02104.1
Hypothetical protein.
 
     0.592
AKJ07418.1
Zinc finger, SWIM-type protein.
  
     0.521
AKI99114.1
SWIM zinc finger domain protein.
  
     0.507
AKJ07419.1
Hypothetical protein.
  
     0.502
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
   
    0.491
AKI98696.1
Hypothetical protein.
 
   
 0.473
AKJ02776.1
SWIM zinc finger domain protein.
  
     0.469
AKJ06509.1
Putative secreted glycosyl hydrolase.
  
     0.450
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.