STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98877.1Rhs-family protein. (1051 aa)    
Predicted Functional Partners:
AKI98876.1
Rhs family protein.
     0.994
AKI98875.1
Hypothetical protein.
  
    0.783
AKJ06509.1
Putative secreted glycosyl hydrolase.
  
     0.599
AKI98694.1
Hypothetical protein.
  
 0.596
AKJ06469.1
Hypothetical protein.
  
 0.562
AKJ07418.1
Zinc finger, SWIM-type protein.
  
     0.525
AKJ02232.1
Hypothetical protein.
  
 0.520
AKJ06468.1
Hypothetical protein.
  
 0.504
AKJ00550.1
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family.
  
   0.496
AKJ07416.1
Retron-type RNA-directed DNA polymerase.
  
    0.495
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.