STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98886.1Sensory box histidine kinase/response regulator. (681 aa)    
Predicted Functional Partners:
AKJ08286.1
Histidine protein kinase AsgD.
  
   0.754
AKI99082.1
Chemotaxis protein methyltransferase CheR.
  
 
 
 0.738
AKJ00885.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.738
AKJ02855.1
Adenylate cyclase.
  
 
   0.737
AKJ04547.1
Diguanylate cyclase/phosphodiesterase.
  
   0.734
AKJ07567.1
Response regulator.
 
     0.734
AKJ01383.1
Chemotaxis protein methyltransferase CheR.
  
   0.729
AKJ00031.1
Sensory box histidine kinase.
  
 
   0.728
AKJ03050.1
Chemotaxis protein methyltransferase CheR.
  
 
   0.728
AKJ01607.1
Sensor histidine kinase.
 
 
   0.719
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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