Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI98893.1Diguanylate cyclase/phosphodiesterase. (153 aa)    
Predicted Functional Partners:
AKJ06476.1
Sensor histidine kinase.
 
 
   0.789
AKJ06792.1
Sensor histidine kinase.
 
 
   0.788
AKI99099.1
Sensor histidine kinase.
 
 
   0.785
AKJ02957.1
Sensor histidine kinase.
 
 
   0.785
AKJ04052.1
Chemotaxis protein methyltransferase CheR.
 
 
   0.785
AKJ05081.1
Sensor histidine kinase.
 
 
 
 0.782
AKJ00723.1
Sensor histidine kinase.
 
 
 
 0.781
AKJ06164.1
Sensor histidine kinase.
 
 
 
 0.781
AKJ04076.1
Sensor histidine kinase.
 
 
 
 0.780
AKJ00977.1
Sensor histidine kinase.
  
 
   0.779
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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