STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98911.1cAMP-binding protein. (488 aa)    
Predicted Functional Partners:
AKJ02511.1
Small-conductance mechanosensitive channel.
 
  
 0.644
AKJ02590.1
Membrane protein, MarC family.
  
    0.550
AKI99108.1
Adenylate cyclase.
 
 
 0.547
AKI98910.1
SAM-dependent methyltransferase.
       0.526
AKJ00347.1
Adenylate cyclase.
 
 
 0.524
AKJ03801.1
Adenylate cyclase.
 
 
 0.518
AKJ04151.1
Adenylate cyclase.
 
 
 0.518
AKJ05306.1
Adenylate cyclase.
 
 
 0.518
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
   
 
 0.515
AKJ05920.1
Adenylate cyclase.
 
 
 0.509
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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