STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98917.1Serine/threonine kinase. (1959 aa)    
Predicted Functional Partners:
AKI98916.1
MoxR-like ATPase.
 
     0.945
AKI98915.1
Hypothetical protein.
       0.773
AKJ01100.1
MoxR-like ATPase.
  
     0.766
AKI98918.1
Hypothetical protein.
 
     0.731
AKJ01645.1
Methionine ABC transporter ATP-binding protein.
  
     0.581
AKJ01834.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
     0.506
AKI99409.1
Hypothetical protein.
  
  
 0.478
AKI98653.1
Hypothetical protein.
  
     0.474
AKJ03979.1
Hypothetical protein.
 
    0.473
AKJ07296.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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