STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98938.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
AKI98937.1
Hypothetical protein.
 
     0.921
AKI98939.1
Hypothetical protein.
  
  
 0.802
AKJ02225.1
Radical SAM domain heme biosynthesis protein.
 
  
 0.655
AKJ02292.1
Radical SAM domain heme biosynthesis protein.
  
  
 0.580
AKJ01479.1
Hypothetical protein.
 
  
 0.570
AKJ06333.1
Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2.
  
    0.543
AKJ04549.1
Ca ion P-type ATPase.
   
    0.463
AKJ08349.1
Lead, cadmium, zinc and mercury transporting ATPase.
   
    0.463
AKJ03628.1
Membrane protein.
  
  
 0.462
AKJ04623.1
Hypothetical protein.
  
  
 0.462
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.