Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI98939.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
AKI98938.1
Hypothetical protein.
  
  
 0.806
AKI98937.1
Hypothetical protein.
       0.773
msrQ
Membrane protein YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using th [...]
  
  
 0.755
AKJ03170.1
5-Hydroxyisourate Hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
   
   0.537
AKI98767.1
Molybdopterin oxidoreductase.
  
 
 0.418
AKJ01769.1
Multicopper oxidase.
  
 
 0.418
AKJ01771.1
Molybdopterin oxidoreductase.
  
 
 0.418
AKJ07147.1
Molybdopterin oxidoreductase.
  
 
 0.418
AKI98936.1
Glucoamylase.
       0.403
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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