STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98976.1Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA. (621 aa)    
Predicted Functional Partners:
AKJ01110.1
Peptide ABC transporter, ATP-binding protein.
 
 0.988
AKJ01111.1
ABC transporter, permease component 1.
 
 0.978
AKJ02670.1
Oligopeptide transport system permease protein OppB; Belongs to the ABC transporter superfamily.
 
 
 0.966
AKJ01112.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
  
  
  0.957
AKJ01740.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
  
  
  0.953
AKJ01036.1
Dipeptide-binding ABC transporter, periplasmic substrate-binding component.
  
  
 
0.922
AKJ00452.1
Dipeptide transport system permease protein DppB.
 
 
 0.879
AKJ01742.1
Oligopeptide transport system permease protein OppC.
 
 
 0.820
AKJ01741.1
Oligopeptide transport system permease protein OppB.
 
 
 0.784
AKI98975.1
Hypothetical protein.
       0.773
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.