STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98999.1Thioesterase family protein. (150 aa)    
Predicted Functional Partners:
AKI98998.1
Hypothetical protein.
 
  
0.887
AKJ02786.1
Isochorismatase.
  
 
 0.725
AKI99000.1
Hypothetical protein.
       0.523
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
  
     0.522
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.521
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.521
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.521
AKI98997.1
Fibroin heavy chain precursor.
       0.517
AKI99425.1
NTP pyrophosphohydrolase including oxidative damage repair enzymes.
  
   
 0.484
plsX
Phosphate:acyl-ACP acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.470
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.