STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99003.1Cell division protein FtsH; Belongs to the AAA ATPase family. (449 aa)    
Predicted Functional Partners:
AKI99001.1
Hypothetical protein.
 
     0.921
AKI99002.1
Hypothetical protein.
       0.782
AKJ07199.1
HtrA protease/chaperone protein.
   
 0.758
AKJ07144.1
GTP cyclohydrolase II.
 
 
 
 0.668
AKJ04143.1
Molybdenum transport ATP-binding protein ModC.
  
     0.657
AKJ04123.1
ABC transporter ATP-binding protein.
  
   0.636
AKJ07778.1
ABC transporter, ATP-binding protein.
  
   0.615
AKJ01996.1
ABC transporter, ATP-binding protein.
  
   0.607
AKJ02423.1
Lipid A export ATP-binding/permease protein MsbA.
 
 0.589
AKJ04136.1
Methionine ABC transporter ATP-binding protein.
  
     0.583
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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