STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99007.1Tetratricopeptide repeat protein. (239 aa)    
Predicted Functional Partners:
AKJ05800.1
Tetratricopeptide repeat protein.
  
     0.727
AKJ02757.1
TPR domain protein, putative component of TonB system.
  
     0.680
AKJ03134.1
Tetratricopeptide repeat protein.
 
   0.677
AKJ01594.1
MJ0042 family finger-like domain/tetratricopeptide repeat protein.
  
     0.674
AKJ05797.1
TPR repeat protein.
  
     0.667
AKJ04696.1
TPR repeat protein.
  
     0.666
AKJ07552.1
TPR domain protein, putative component of TonB system.
  
     0.636
AKJ06711.1
Tetratricopeptide repeat protein.
  
     0.620
AKJ01576.1
Adenylate cyclase.
  
     0.607
AKJ02311.1
TPR repeat protein.
  
     0.601
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.