STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99008.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
AKI99009.1
Outer membrane vitamin B12 receptor BtuB.
 
   
 0.835
AKI99010.1
Hypothetical protein.
       0.773
AKJ06853.1
Glycosyl hydrolase, BNR repeat precursor.
  
     0.664
AKJ06026.1
Trypsin domain protein.
  
     0.660
AKI98750.1
Trypsin domain protein.
  
     0.658
AKJ04889.1
Glycosyl hydrolase, BNR repeat precursor.
  
     0.636
AKI99014.1
Glycosyl hydrolase, BNR repeat precursor.
 
     0.612
AKJ08209.1
BNR/Asp-box repeat domain protein.
  
     0.573
AKJ08402.1
Hypothetical protein.
  
     0.519
AKJ00264.1
Xaa-Pro aminopeptidase family enzyme.
  
     0.501
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.