STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99014.1Glycosyl hydrolase, BNR repeat precursor. (793 aa)    
Predicted Functional Partners:
AKJ06853.1
Glycosyl hydrolase, BNR repeat precursor.
  
     0.769
AKJ08209.1
BNR/Asp-box repeat domain protein.
  
     0.725
AKI99008.1
Hypothetical protein.
 
     0.612
AKJ05419.1
Hypothetical protein.
  
     0.544
AKJ04743.1
Hypothetical protein.
  
     0.517
AKI99009.1
Outer membrane vitamin B12 receptor BtuB.
  
     0.497
AKI99013.1
Hypothetical protein.
       0.494
AKJ03744.1
Hypothetical protein.
 
     0.479
AKI99253.1
Glycosyl hydrolase, BNR repeat protein.
  
     0.443
AKJ06146.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.