STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99020.1tolB protein precursor protein. (1105 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.672
hutH
Histidine ammonia-lyase.
  
  
 0.654
AKI99087.1
2OG-Fe(II) oxygenase family enzyme.
  
     0.637
AKJ01126.1
Hypothetical protein.
  
     0.636
AKJ00326.1
Hypothetical protein.
  
 
 
 0.575
AKJ07328.1
Peptidase S9, prolyl oligopeptidase active site region precursor.
 
    0.533
AKJ01016.1
Hypothetical protein.
  
     0.526
AKJ04067.1
Xaa-Pro aminopeptidase family enzyme.
 
     0.523
AKI99025.1
Aminopeptidase.
  
     0.516
AKJ07971.1
Cyclase.
  
     0.509
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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