STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99022.1Cell surface protein. (435 aa)    
Predicted Functional Partners:
AKI98734.1
Hypothetical protein.
  
     0.765
AKI99384.1
Hypothetical protein.
  
     0.756
AKJ03490.1
Hypothetical protein.
  
     0.753
AKJ00622.1
Hypothetical protein.
  
     0.657
AKJ08274.1
Cell surface protein.
  
     0.583
AKJ00624.1
Cell surface protein.
  
     0.562
AKJ06239.1
Trehalose synthase.
  
     0.523
AKJ07549.1
Hypothetical protein.
  
 
   0.515
AKJ01279.1
Hypothetical protein.
  
     0.496
AKJ00625.1
Hypothetical protein.
  
     0.494
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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