Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AKI99025.1Aminopeptidase. (484 aa)    
Predicted Functional Partners:
AKJ05512.1
Peptidase M28.
  
     0.673
AKJ03504.1
Peptidyl-dipeptidase A precursor.
 
     0.670
AKJ00251.1
Amidohydrolase precursor.
  
     0.605
AKJ08020.1
Amidohydrolase precursor.
  
     0.576
AKJ05956.1
Alanyl dipeptidyl peptidase.
  
    0.531
AKI99020.1
tolB protein precursor protein.
  
     0.516
AKJ01609.1
JmjC domain protein.
  
     0.515
AKJ03758.1
Hypothetical protein.
  
     0.498
AKJ06300.1
Hypothetical protein.
  
    0.493
AKI99026.1
Hypothetical protein.
       0.492
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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