STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99034.1Fatty acid desaturase family protein. (288 aa)    
Predicted Functional Partners:
AKI99432.1
Hypothetical protein.
  
     0.762
AKI98965.1
Tryptophan synthase alpha chain.
  
     0.760
AKJ02798.1
Hypothetical protein.
 
     0.758
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
     0.754
AKI99030.1
Hypothetical protein.
  
     0.749
AKJ04256.1
Hypothetical protein.
  
     0.749
AKJ07487.1
Hypothetical protein.
  
     0.747
AKJ04983.1
PE family protein.
  
     0.743
AKJ06852.1
Putative secreted protein.
  
     0.740
AKJ04728.1
Putative 2-component regulator.
  
     0.734
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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