STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99036.1Signal transduction histidine kinase CheA. (1770 aa)    
Predicted Functional Partners:
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.582
AKI99035.1
Hypothetical protein.
       0.572
AKI99037.1
Hypothetical protein.
       0.572
AKI99038.1
Fatty acid desaturase family protein.
       0.558
AKJ03155.1
FHA domain/GGDEF domain protein.
  
 
 0.544
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.543
AKJ03082.1
Hypothetical protein.
  
     0.500
AKI99496.1
PAS/PAC domain protein.
 
 
0.497
AKI99572.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.478
AKJ03002.1
Circadian input kinase A.
 
 0.472
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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