STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99039.1Endoglucanase A precursor. (912 aa)    
Predicted Functional Partners:
AKI99040.1
Serine acetyltransferase.
 
     0.821
AKI99043.1
Glycosyl transferase, group 2 family protein.
 
  
 0.772
AKI99038.1
Fatty acid desaturase family protein.
  
     0.711
AKI99034.1
Fatty acid desaturase family protein.
  
     0.706
AKI99030.1
Hypothetical protein.
  
     0.638
AKJ02052.1
Heavy metal RND efflux outer membrane protein, CzcC family.
  
 
   0.576
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
     0.572
AKJ04283.1
Heavy metal RND efflux outer membrane protein, CzcC family.
  
 
   0.570
AKI99041.1
Hypothetical protein.
       0.562
AKJ00507.1
Hypothetical protein.
  
     0.557
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.