STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99040.1Serine acetyltransferase. (517 aa)    
Predicted Functional Partners:
AKI99043.1
Glycosyl transferase, group 2 family protein.
 
  
 0.857
AKI99066.1
Cysteine synthase.
 
 
 0.822
AKI99039.1
Endoglucanase A precursor.
 
     0.821
AKJ05942.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.819
AKJ06288.1
Cystathionine beta-synthase.
 
 
 0.770
cysS
Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.765
AKI99291.1
Cysteine synthase.
 
 
 0.745
AKJ07651.1
Cystathionine beta-synthase.
 
 
 0.711
AKI99038.1
Fatty acid desaturase family protein.
  
     0.650
AKI99041.1
Hypothetical protein.
       0.634
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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