Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99070.1Hydrolase, alpha/beta fold family. (250 aa)    
Predicted Functional Partners:
AKI99071.1
Hypothetical protein.
  
    0.773
AKI98542.1
Lactoylglutathione lyase.
 
 
    0.667
AKI99072.1
Hypothetical protein.
       0.655
AKI99073.1
Hypothetical protein.
       0.655
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
 
 0.626
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.620
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.613
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.612
AKJ05228.1
Carboxylesterase.
  
     0.534
AKJ03529.1
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.532
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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