STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99087.12OG-Fe(II) oxygenase family enzyme. (235 aa)    
Predicted Functional Partners:
AKI99088.1
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor.
       0.768
AKJ02786.1
Isochorismatase.
   
    0.732
AKJ07931.1
ABC-type Na+ efflux pump, permease component.
  
     0.676
AKJ01487.1
Hypothetical protein.
  
     0.641
AKI99089.1
Hypothetical protein.
       0.638
AKI99020.1
tolB protein precursor protein.
  
     0.637
AKJ01522.1
Hypothetical protein.
  
     0.578
AKJ08427.1
TonB-dependent siderophore receptor.
  
  
 0.578
AKJ02047.1
Aminopeptidase.
  
     0.574
AKJ05623.1
Inosine/xanthosine triphosphatase.
  
     0.566
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.