Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99096.1Putative glyoxylase family protein. (129 aa)    
Predicted Functional Partners:
AKI99094.1
Threonine dehydratase.
 
 
 0.906
AKI99736.1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
     
 0.904
AKJ05735.1
Hypothetical protein.
   
 0.904
AKJ06078.1
Hypothetical protein.
   
 0.904
AKJ05364.1
Methylmalonyl-CoA epimerase.
     
  0.900
AKJ05473.1
Hypothetical protein.
     
  0.900
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.817
AKJ01415.1
Amine oxidase.
     
 0.803
AKJ06883.1
Threonine dehydratase.
   
 
 0.802
AKJ06954.1
Threonine dehydratase.
   
 
 0.802
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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