Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99100.1Diguanylate cyclase/phosphodiesterase. (448 aa)    
Predicted Functional Partners:
AKI99099.1
Sensor histidine kinase.
 
 
 
0.859
AKJ08286.1
Histidine protein kinase AsgD.
 
 
 0.751
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.736
AKI99082.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.720
AKJ01383.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.712
AKI99519.1
Sensory box histidine kinase.
 
 
 
0.710
AKI99219.1
Sensor histidine kinase/response regulator.
 
 
0.693
AKI98556.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.678
AKJ03050.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.676
AKJ08110.1
Histidine protein kinase AsgD.
 
 
 
 0.676
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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