STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99101.1Histone acetyltransferase HPA2. (164 aa)    
Predicted Functional Partners:
AKI99099.1
Sensor histidine kinase.
       0.548
AKI99100.1
Diguanylate cyclase/phosphodiesterase.
       0.548
AKJ08101.1
Hypothetical protein.
  
     0.540
AKI99380.1
ATP synthase F0 sector subunit b.
  
     0.537
AKI98778.1
Hypothetical protein.
  
     0.536
AKJ07058.1
Hypothetical protein.
  
     0.533
AKI99188.1
Acetyltransferase, GNAT family.
 
  
 0.528
AKJ06908.1
Hypothetical protein.
  
     0.526
AKJ08440.1
Hypothetical protein.
  
     0.519
AKJ00336.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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