Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
AKI99104.1Alkaline phosphatase. (952 aa)    
Predicted Functional Partners:
AKJ04220.1
Hypothetical protein.
  
    0.704
AKJ03579.1
Hypothetical protein.
 
    0.627
AKI99103.1
Hypothetical protein.
       0.625
AKJ08337.1
OmpA domain protein.
 
   
 0.611
AKJ02365.1
Putative Ig-like domain protein.
  
     0.609
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
 
 
 0.598
AKJ06869.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.557
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
  
     0.553
AKI99520.1
Hypothetical protein.
  
   
 0.531
AKJ07534.1
Transcriptional regulator, MarR family.
  
  
 0.503
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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