STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99115.1Hypothetical protein. (2158 aa)    
Predicted Functional Partners:
AKI99114.1
SWIM zinc finger domain protein.
 
     0.929
AKI99350.1
Phosphoesterase protein.
 
     0.780
AKJ00837.1
Peptidase, M19 family.
  
   0.775
AKJ01018.1
Peptidase, M19 family.
  
   0.775
AKI99006.1
TPR repeat protein.
  
 
  0.774
AKI99735.1
Inner spore coat protein H.
  
     0.774
AKI99817.1
Hypothetical protein.
 
    0.774
AKJ06761.1
Molybdate metabolism regulator.
 
     0.773
AKI99287.1
Hypothetical protein.
 
    0.764
AKJ02042.1
RTX toxin.
 
     0.762
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.