STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99135.1ATPase domain protein. (450 aa)    
Predicted Functional Partners:
AKI99134.1
Hypothetical protein.
       0.773
AKI99136.1
Hypothetical protein.
       0.773
AKJ02058.1
Flagellar sensor histidine kinase FleS.
  
 
   0.730
AKJ02841.1
Sensor histidine kinase.
  
     0.681
AKJ07967.1
Histidine kinase sensor protein.
  
 
   0.673
AKJ07704.1
Flagellar sensor histidine kinase FleS.
  
 
   0.664
AKJ01881.1
Sensory box sensor histidine kinase.
  
 
   0.662
AKJ03303.1
Sensory box histidine kinase/response regulator.
  
 
   0.660
AKJ00270.1
Hypothetical protein.
 
   0.659
AKJ02816.1
Sensor histidine kinase/response rgulator.
 
 
 
 0.631
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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