Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AKI99138.1Putative dye-decolorizing peroxidase. (268 aa)    
Predicted Functional Partners:
AKI99137.1
Hypothetical protein.
       0.773
AKJ03433.1
Encapsulating protein for a DyP-type peroxidase or ferritin-like protein oligomers.
   
 
 0.694
AKJ06983.1
Ferrous iron transport permease EfeU.
  
  
 0.605
AKI99815.1
Putative lipoprotein.
  
  
 0.594
AKJ06008.1
Hypothetical protein.
  
  
 0.594
AKI99134.1
Hypothetical protein.
       0.568
AKI99136.1
Hypothetical protein.
       0.568
AKI99135.1
ATPase domain protein.
  
    0.566
AKI99139.1
Hypothetical protein.
       0.440
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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