Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99145.1Hypothetical protein. (564 aa)    
Predicted Functional Partners:
AKI99146.1
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
AKJ06809.1
Hypothetical protein.
  
     0.499
AKJ04098.1
Hypothetical protein.
  
   
 0.496
AKJ03535.1
Extracellular protease precursor.
  
     0.492
AKJ04752.1
Extracellular protease precursor.
  
     0.485
AKJ02238.1
Hypothetical protein.
  
   
 0.481
AKJ02237.1
Hypothetical protein.
  
     0.471
AKJ04097.1
Hypothetical protein.
  
     0.465
AKJ06818.1
Protein ImpG/VasA.
 
     0.463
AKJ06815.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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