STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99148.1Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)    
Predicted Functional Partners:
AKJ00052.1
Non-ribosomal peptide synthetase.
 
  
 0.908
AKJ04165.1
Low-specificity L-threonine aldolase.
    
  0.904
AKJ02788.1
Siderophore biosynthesis non-ribosomal peptide synthetase modules.
 
  
 0.903
AKJ06584.1
Non-ribosomal peptide synthetase.
 
    0.892
AKJ03361.1
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.837
AKI99147.1
Hypothetical protein.
       0.732
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
      0.694
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.582
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.582
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.582
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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