STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99165.1Lignostilbene-alpha,beta-dioxygenase. (458 aa)    
Predicted Functional Partners:
AKI99164.1
Transcriptional regulator, TetR family.
 
     0.748
AKJ02510.1
Oligo alginate lyase.
  
     0.610
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
  
     0.547
AKJ04220.1
Hypothetical protein.
  
     0.506
AKJ00418.1
Hypothetical protein.
  
     0.497
AKJ03329.1
Rieske 2Fe-2S family protein.
  
   
 0.493
AKJ03257.1
Adventurous gliding motility protein K.
  
     0.470
AKJ07972.1
PE-PGRS virulence associated protein.
  
     0.451
AKJ07534.1
Transcriptional regulator, MarR family.
  
     0.437
AKJ04215.1
Hypothetical protein.
  
   
 0.426
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.