STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99175.1Putative bicarbonate transporter, ICT family. (553 aa)    
Predicted Functional Partners:
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
  
  
 0.820
AKJ03579.1
Hypothetical protein.
 
     0.623
AKJ05391.1
Internalin, putative.
  
     0.581
AKI99043.1
Glycosyl transferase, group 2 family protein.
 
  
 0.569
AKI99973.1
Zn-dependent hydrolase.
  
    0.557
AKI99380.1
ATP synthase F0 sector subunit b.
  
     0.549
AKI99174.1
Hypothetical protein.
       0.535
AKJ08101.1
Hypothetical protein.
  
     0.520
AKI99277.1
Hypothetical protein.
  
     0.505
AKJ04728.1
Putative 2-component regulator.
  
     0.499
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.