Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99184.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AKI99185.1
Hypothetical protein.
       0.773
AKI99186.1
Hypothetical protein; Belongs to the MtfA family.
       0.601
AKI99496.1
PAS/PAC domain protein.
  
 
 0.535
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.517
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.496
AKI99183.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
       0.476
AKJ00035.1
Hypothetical protein.
  
 
 0.464
AKI99519.1
Sensory box histidine kinase.
  
 
 0.434
AKI98556.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.422
AKJ03002.1
Circadian input kinase A.
  
 
 0.422
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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