Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99203.1Putative asmA protein precursor. (897 aa)    
Predicted Functional Partners:
AKJ06641.1
Hypothetical protein.
  
   
 0.798
AKJ07478.1
Hypothetical protein.
  
   
 0.794
AKJ02410.1
TPR domain protein, putative component of TonB system.
 
     0.781
AKJ05847.1
tolB protein precursor protein.
 
   
 0.781
AKJ00779.1
Cell division protein FtsK.
  
   
 0.780
AKJ02600.1
Cell division protein FtsK.
  
   
 0.774
AKJ02316.1
PDZ domain protein.
  
     0.771
AKJ05724.1
General secretion pathway protein I.
 
     0.770
AKJ02194.1
Hypothetical protein.
 
     0.768
AKJ02163.1
Response regulator/GGDEF/GAF domain protein.
  
     0.767
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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