Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKI99209.1Arachidonate 15-lipoxygenase precursor. (680 aa)    
Predicted Functional Partners:
AKI99516.1
Arachidonate 15-lipoxygenase precursor.
  
  
 
0.912
AKI99035.1
Hypothetical protein.
 
   
 0.803
AKJ04450.1
Hypothetical protein.
  
     0.703
AKI98448.1
Hypothetical protein.
  
     0.697
AKJ00774.1
Hypothetical protein.
  
     0.688
AKI98532.1
Putative carbohydrate-binding protein.
  
     0.683
AKJ06614.1
Hypothetical protein.
  
     0.682
AKJ00175.1
Hypothetical protein.
  
     0.664
AKJ03408.1
Hypothetical protein.
  
     0.654
AKJ01795.1
Putative fibrocystin L.
  
     0.630
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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