Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99212.1Transcriptional repressor, BlaI/MecI family. (131 aa)    
Predicted Functional Partners:
AKI99211.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
 
 
 0.996
AKJ00003.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
 
 
 0.985
AKJ03674.1
Transcriptional regulator, MecI family.
  
  
 
0.921
AKI99210.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
  
  
 0.703
AKJ07579.1
Beta-lactamase.
 
   
 0.527
AKJ03673.1
Soluble lytic murein transglycosylase.
 
  
 0.520
AKI99213.1
Hypothetical protein.
       0.497
AKI99209.1
Arachidonate 15-lipoxygenase precursor.
       0.415
AKJ00002.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
  
  
 0.411
AKI99214.1
Hypothetical protein.
       0.408
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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