Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99214.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
AKI99213.1
Hypothetical protein.
  
 
 0.819
AKJ02100.1
Inosine-5'-monophosphate dehydrogenase.
  
 
 0.553
AKJ06288.1
Cystathionine beta-synthase.
  
 
 0.553
AKJ07651.1
Cystathionine beta-synthase.
  
 
 0.553
AKI98775.1
Putative metalloprotease/ CBS domain protein; Belongs to the peptidase M50B family.
  
 
 0.552
AKI99215.1
Hypothetical protein.
       0.491
AKI99211.1
Regulatory sensor-transducer, BlaR1/MecR1 family.
       0.408
AKI99212.1
Transcriptional repressor, BlaI/MecI family.
       0.408
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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