STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99239.1Lipase. (347 aa)    
Predicted Functional Partners:
AKJ03190.1
DNA gyrase subunit A.
  
     0.741
AKJ06371.1
Hypothetical protein.
  
     0.739
AKJ05944.1
Hypothetical protein.
  
     0.722
AKJ07333.1
Trypsin domain protein; Belongs to the peptidase S1B family.
  
     0.695
AKJ01860.1
Hypothetical protein.
  
     0.686
AKJ07506.1
SusC, outer membrane protein.
  
     0.671
AKI99912.1
Myosin heavy chain.
  
     0.656
AKJ07508.1
Putative outer membrane protein.
  
     0.656
AKI98628.1
Lactonizing lipase precursor.
  
     0.630
AKJ04524.1
Hypothetical protein.
  
     0.625
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.