STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99248.1Endonuclease/exonuclease/phosphatase family protein. (645 aa)    
Predicted Functional Partners:
AKI99451.1
Apolipoprotein N-acyltransferase.
  
     0.768
AKI99246.1
Tetratricopeptide repeat protein.
  
     0.759
AKJ01518.1
Phage lysin, 1,4-beta-N-acetylmuramidase.
  
     0.754
AKJ03802.1
Hypothetical protein.
  
     0.722
AKJ03788.1
Acetyltransferase, GNAT family.
  
     0.709
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.704
AKJ07493.1
Cytochrome c family protein.
  
     0.679
AKJ01531.1
Hypothetical protein.
  
     0.657
AKJ02192.1
Hypothetical protein.
  
     0.653
AKJ04809.1
Milk-clotting protease.
  
     0.647
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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