Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99277.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
AKI99276.1
Hypothetical protein.
 
     0.813
AKJ00808.1
Aminoglycoside N3-acetyltransferase.
 
     0.705
AKI98993.1
Putative DNA-binding regulatory protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.701
AKJ08101.1
Hypothetical protein.
  
     0.691
AKI99380.1
ATP synthase F0 sector subunit b.
  
     0.682
AKJ03569.1
Phage tail fiber protein.
  
     0.670
AKI99275.1
Hypothetical protein.
 
 
   0.665
AKI98778.1
Hypothetical protein.
  
     0.661
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
 
 0.643
AKI99073.1
Hypothetical protein.
  
   
 0.628
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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