STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99285.1Sensory box histidine kinase/response regulator. (1048 aa)    
Predicted Functional Partners:
AKI99082.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.714
AKI99496.1
PAS/PAC domain protein.
 
 
0.698
AKI98556.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.671
AKJ03050.1
Chemotaxis protein methyltransferase CheR.
  
 
   0.661
AKJ07567.1
Response regulator.
 
     0.661
AKI99980.1
Two-component hybrid sensor and regulator.
  
 
   0.645
AKJ04766.1
Circadian input kinase A.
  
 
   0.630
AKJ07725.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.625
AKJ00126.1
Histidine protein kinase AsgD.
 
 
 
 0.606
AKJ01622.1
Circadian input kinase A.
 
 
0.601
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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